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How to Handle Duplicate Invoices Automatically

Duplicate invoice payments are embarrassingly common — and recovering overpayments from suppliers is awkward and time-consuming. Here's how to stop duplicates before they become double payments.

20 May 20255 min read

How duplicate invoices enter your system

  • Supplier sends the same invoice twice (different email, same attachment)
  • Invoice forwarded by a colleague who didn't know you already had it
  • PDF renamed or reformatted but same invoice number
  • Statement includes invoices already recorded
  • Paper invoice scanned while the email version is also processed

What duplicate detection checks

Effective duplicate detection goes beyond identical files. InboxBill checks: same invoice number from the same supplier (regardless of email source), same amount to the same supplier within a configurable window (useful when invoice numbers change), and same PDF content hash (catches reformatted files).

What to do when a duplicate is detected

1

Review both versions

Sometimes what looks like a duplicate is a corrected invoice or a credit note. Compare the two before dismissing either.

2

Mark as duplicate

Flag the second occurrence as a duplicate. It's archived for reference but not synced to FreeAgent.

3

Notify the sender if needed

If a supplier is repeatedly sending duplicates, a short note resolves it and prevents future confusion.

Stop duplicate invoices before they cause problems

InboxBill flags potential duplicates automatically for your review.

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